BMC Bioinformatics

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Identification of DNA-binding proteins using support vector machines and evolutionary profiles

Manish Kumar, Michael M Gromiha and Gajendra PS Raghava*

BMC Bioinformatics 2007, 8:463 doi:10.1186/1471-2105-8-463

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BioMed Central: 7 citations

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Analysis and prediction of cancerlectins using evolutionary and domain information

Ravi Kumar, Bharat Panwar, Jagat S Chauhan, Gajendra PS Raghava BMC Research Notes 2011, 4:237 (20 July 2011)

Research   Open Access

Predicting and analyzing DNA-binding domains using a systematic approach to identifying a set of informative physicochemical and biochemical properties

Hui-Lin Huang, I-Che Lin, Yi-Fan Liou, Chia-Ta Tsai, Kai-Ti Hsu, Wen-Lin Huang, Shinn-Jang Ho, Shinn-Ying Ho BMC Bioinformatics 2011, 12(Suppl 1):S47 (15 February 2011)

Research   Open Access

Identification of protein functions using a machine-learning approach based on sequence-derived properties

Bum Lee, Moon Shin, Young Oh, Hae Oh, Keun Ryu Proteome Science 2009, 7:27 (9 August 2009)

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Enzyme classification with peptide programs: a comparative study

Daniel Faria, António EN Ferreira, André O Falcão BMC Bioinformatics 2009, 10:231 (24 July 2009)

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Properties of non-coding DNA and identification of putative cis-regulatory elements in Theileria parva

Xiang Guo, Joana C Silva BMC Genomics 2008, 9:582 (3 December 2008)

Theileria parva, the apicomplexan parasite that causes East Coast fever in cattle, has a highly compact genome favoring short introns and intergenic regions with conserved upstream motifs that potentially regulate transcription.

Research article   Open Access

The combination approach of SVM and ECOC for powerful identification and classification of transcription factor

Guangyong Zheng, Ziliang Qian, Qing Yang, Chaochun Wei, Lu Xie, Yangyong Zhu, Yixue Li BMC Bioinformatics 2008, 9:282 (16 June 2008)

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Identification of Proteins Secreted by Malaria Parasite into Erythrocyte using SVM and PSSM profiles

Ruchi Verma, Ajit Tiwari, Sukhwinder Kaur, Grish C Varshney, Gajendra PS Raghava BMC Bioinformatics 2008, 9:201 (16 April 2008)