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Open AccessHighly AccessResearch article

In situ analysis of cross-hybridisation on microarrays and the inference of expression correlation

Tineke Casneuf1,2,3 email, Yves Van de Peer1,2 email and Wolfgang Huber3 email

Department of Plant Systems Biology, VIB, B-9052 Ghent, Belgium

Department of Molecular Genetics, Ghent University, B-9052 Ghent, Belgium

EMBL – European Bioinformatics Institute, Cambridge CB10 1SD, UK

author email corresponding author email

BMC Bioinformatics 2007, 8:461doi:10.1186/1471-2105-8-461

Published: 26 November 2007

Additional files

Additional file 1:

Off-target scores of Custom-made versus Affymetrix CDF. Barplot of the off-target sensitivity scores Math of all probe set pairs in the Affymetrix (in pink) and the custom-made CDF (in light blue). This figure only shows pairs with an Math ≥ 80.

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