  Research articleIdentification of tissue-specific cis-regulatory modules based on interactions between transcription factorsXueping Yu1 1 Wilmer Institute, Johns Hopkins University School of Medicine, Baltimore, MD 21287, USA 2 Department of Molecular Biology and Genetics, Johns Hopkins University School of Medicine, Baltimore, MD 21287, USA 3 Department of Neuroscience, Johns Hopkins University School of Medicine, Baltimore, MD 21287, USA 4 McKusick-Nathans Institute of Genetic Medicine, Johns Hopkins University School of Medicine, Baltimore, MD 21287, USA
BMC Bioinformatics 2007, 8:437doi:10.1186/1471-2105-8-437
Additional filesAdditional file 1: Tissue specific genes. These preferentially expressed genes in 30 human tissues were derived from EST database using methods described in previous work [22]. Format: XLS Size: 238KB Download file This file can be viewed with: Microsoft Excel Viewer Additional file 2: Tissue specific TF interactions. These significant TF pairs were calculated according to their overrepresented co-occurrence and distance constraint [22]. Format: XLS Size: 1.2MB Download file This file can be viewed with: Microsoft Excel Viewer Additional file 3: Predictions of tissue specific CRMs. Format: XLS Size: 1.4MB Download file This file can be viewed with: Microsoft Excel Viewer Additional file 4: Enriched functional categories in cCRMs and ncCRMs whose target genes' conservation scores are greater than 0.5. Format: XLS Size: 16KB Download file This file can be viewed with: Microsoft Excel Viewer |
|
|
|
 |  | Log on / register Feedback | Support | My details |
on Google Scholar
author email
corresponding author email|
|
| © 1999-2009 BioMed Central Ltd unless otherwise stated. Part of Springer Science+Business Media. |