BMC Bioinformatics

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The Protein Identifier Cross-Referencing (PICR) service: reconciling protein identifiers across multiple source databases

Richard G Côté, Philip Jones, Lennart Martens, Samuel Kerrien, Florian Reisinger, Quan Lin, Rasko Leinonen, Rolf Apweiler and Henning Hermjakob*

BMC Bioinformatics 2007, 8:401 doi:10.1186/1471-2105-8-401

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Software   Open Access

The BridgeDb framework: standardized access to gene, protein and metabolite identifier mapping services

Martijn P van Iersel, Alexander R Pico, Thomas Kelder, Jianjiong Gao, Isaac Ho, Kristina Hanspers, Bruce R Conklin, Chris T Evelo BMC Bioinformatics 2010, 11:5 (4 January 2010)

Research   Open Access

Extraction, integration and analysis of alternative splicing and protein structure distributed information

Matteo D'Antonio, Marco Masseroli BMC Bioinformatics 2009, 10(Suppl 12):S15 (15 October 2009)

Software   Open Access

ArrayIDer: automated structural re-annotation pipeline for DNA microarrays

Bart HJ van den Berg, Jay H Konieczka, Fiona M McCarthy, Shane C Burgess BMC Bioinformatics 2009, 10:30 (23 January 2009)

Research article   Open Access Highly Accessed

Matching curated genome databases: a non trivial task

Stéphane Descorps-Declère, Matthieu Barba, Bernard Labedan BMC Genomics 2008, 9:501 (24 October 2008)

Software   Open Access

OntoDas – a tool for facilitating the construction of complex queries to the Gene Ontology

Kieran O'Neill, Alexander Garcia, Anita Schwegmann, Rafael C Jimenez, Dan Jacobson, Henning Hermjakob BMC Bioinformatics 2008, 9:437 (16 October 2008)

Research article   Open Access Highly Accessed

iRefIndex: A consolidated protein interaction database with provenance

Sabry Razick, George Magklaras, Ian M Donaldson BMC Bioinformatics 2008, 9:405 (30 September 2008)