Resolution:
## Figure 9.
Correlation errors for ln(k. (a) The relative error of predicted ln(k_{cat}/K_{m}) for TPI for (a) different protein structural models and (b) different specifications
of the MIF comparison region_{cat}/K_{m}) values of protein structural models generated by 3 different modeling protocols
(see Methods for details) as a function of radius R of the sphere of comparison (with
error defined as in expression (3) of the Theory section). Calculations were done
with a skin accessible to a probe of radius δ = 2 Å. (b) Relative error in correlation
of protein structural models using the ''Turbo'' protocol in Modeller with different
probe radii δ in Å (see Methods). The radius of the comparison region, R, is varied
from 7.5 to 30 Å and it is centered on the atom L230O. The degree of correlation is
described by the relative correlation error, formula (3).
Gabdoulline |