Table 4 |
||||||||
|
Total number of PDB entries per ligand and matches against the generated 3D patterns |
||||||||
|
AMP |
ADP |
ATP |
ANP |
ACP |
GMP |
GDP |
GTP |
|
|
|
||||||||
|
PDB entries containing ligand |
128 |
406 |
234 |
125 |
29 |
27 |
199 |
77 |
|
Hits against the 13 patterns |
14.8% |
30.5% |
35.5% |
36.8% |
44.8% |
0.0% |
0.5% |
1.3% |
|
PDB50 entries in valid clusters |
16.0% |
30.8% |
23.3% |
/ |
/ |
/ |
/ |
/ |
|
|
||||||||
|
Nebel et al. BMC Bioinformatics 2007 8:321 doi:10.1186/1471-2105-8-321 |
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