Table 1

Changes in alignment dimensions caused by MaxAlign

Original

MaxAlign


Alignment area

1494

16000

Number of gap-free columns

19.4

162.6

Number of sequences

139.8

112.0


Average values for alignment dimensions before and after processing with MaxAlign. Estimated from 5242 Pfam alignments with between 30 and 500 sequences.

Gouveia-Oliveira et al. BMC Bioinformatics 2007 8:312   doi:10.1186/1471-2105-8-312

Open Data