Annotation and query of tissue microarray data using the NCI Thesaurus

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Nigam H Shah¹ , Daniel L Rubin¹ , Inigo Espinosa² , Kelli Montgomery² and Mark A Musen¹

¹Stanford Medical Informatics, School of Medicine, Stanford University, Stanford, CA 94305, USA

²Department of Pathology, School of Medicine, Stanford University, Stanford, CA 94305, USA

author email corresponding author email

BMC Bioinformatics 2007, 8:296doi:10.1186/1471-2105-8-296


Published:	8 August 2007

Additional file 1:

Mapping Code. This zipped file contains the Perl scripts to perform the mapping of the TMA annotations as described in the methods section.

Format: ZIP Size: 8KB Download file

Additional file 2:

Browsing Code. This zipped file contains the Perl scripts to create the browsing interface shown in Figure 1.

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