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Open AccessHighly AccessResearch article

Portraits of breast cancer progression

Gul S Dalgin1* email, Gabriela Alexe2,3* email, Daniel Scanfeld2 email, Pablo Tamayo2 email, Jill P Mesirov2 email, Shridar Ganesan4 email, Charles DeLisi5 email and Gyan Bhanot3,4,5,6 email

Mol. Bio., Cell. Bio. and Biochem. Prog., Boston University, Boston, MA 02215, USA

The Broad Institute of MIT and Harvard, 7 Cambridge Center, Cambridge MA, 02142, USA

The Simons Center for Systems Biology, Institute for Advanced Study, Princeton, NJ 08540, USA

Cancer Institute of New Jersey, 195 Little Albany Street, New Brunswick, NJ 08903, USA

Center for Advanced Genomic Technology, Department of Biomedical Engineering, Boston University, Boston, MA 02215, USA

BioMaPS Institute and Department of Biomedical Engineering, Rutgers University, Piscataway, NJ 08854, USA

author email corresponding author email* Contributed equally

BMC Bioinformatics 2007, 8:291doi:10.1186/1471-2105-8-291

Published: 6 August 2007

Additional files

Additional file 1:

Supplementary Table 1. A listing of the samples used in our study. Clinical stage and grade are as provided in the data of Ma et al (PNAS 2003). The column "Subtype" presents our classification into Normals and six disease subtypes (Basal, HER2+, Luminal A, Luminal B1, Luminal B2 and Luminal B3) based on PCA and Clustering. The remaining columns list clinical information as provided in the data from Ma et al (PNAS 2003).

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