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Open AccessResearch article

Automating document classification for the Immune Epitope Database

Peng Wang1 email, Alexander A Morgan2 email, Qing Zhang1 email, Alessandro Sette1 email and Bjoern Peters1 email

1The La Jolla Institute for Allergy and Immunology, 9420 Athena Circle, La Jolla, CA 92037, USA

2Biomedical Informatics, Stanford University School of Medicine, Stanford, California 94305-5120, USA

author email corresponding author email

BMC Bioinformatics 2007, 8:269doi:10.1186/1471-2105-8-269

Published: 26 July 2007

Additional files

Additional file 1:

PubMed queries. PubMed queries to extract potentially IEDB relevant abstracts.

Format: DOC Size: 81KB Download file

This file can be viewed with: Microsoft Word Viewer

Additional file 2:

abstracts. The zip file contains four text files describing the IEDB relevance of PubMed abstracts used in this study (ac_id.txt: category A-C pathogen, allergen_id.txt: allergen, er_id.txt: emerging-reemerging diseases and other_id.txt: pathogens in other categories). Each line has three fields: PubMed PMID, relevance to IEDB and publication year.

Format: ZIP Size: 96KB Download file


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