 Research articleReuse of structural domain–domain interactions in protein networksBenjamin Schuster-Böckler Wellcome Trust Sanger Institute, Wellcome Trust Genome Campus, Hinxton, UK
BMC Bioinformatics 2007, 8:259doi:10.1186/1471-2105-8-259
Additional filesAdditional file 1: iPfam_pair_frequencies. En Excel file containing the frequencies of all iPfam domain pairs for all five species, i.e. the number of interactions that contain the respective iPfam domain pair. Format: XLS Size: 211KB Download file This file can be viewed with: Microsoft Excel Viewer Additional file 2: iPfam_architectures. Two Excel sheets containing the frequencies of all iPfam domain architectures in S. cerevisiae and H. sapiens experimental interactions, i.e. the number of proteins that are composed of a certain set of iPfam domains. Format: XLS Size: 109KB Download file This file can be viewed with: Microsoft Excel Viewer Additional file 3: iPfam_pair_conservation. An Excel spreadsheet containing the 107 iPfam domain pairs conserved amongst E. coli, S. cerevisiae and H. sapiens and their frequencies. Format: XLS Size: 16KB Download file This file can be viewed with: Microsoft Excel Viewer Additional file 4: iPfam_frequencies. An Excel file containing the frequencies of each of the iPfam domains for all five species, i.e. the number of proteins containing the respective domain. Format: XLS Size: 270KB Download file This file can be viewed with: Microsoft Excel Viewer Additional file 5: iPfam_inter-intrachain. An Excel file listing the number of interchain and intrachain interactions in all PDB structures for each iPfam domain pair. Format: XLS Size: 395KB Download file This file can be viewed with: Microsoft Excel Viewer |
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