Striped view of multiple data types. (A) Transcription and splicing data, collected on whole-genome exon tiling microarrays (see supplemental methods), are represented by stripes of color on a functionally organized list of monoamine G-protein-coupled receptors. Transcriptional changes for 11 different human tissues are displayed as the center color of the gene box, and splicing for the gene across all tissues is displayed as the rim color. (B) In the context of glycolysis and gluconeogenesis, mRNA and protein levels change in response to carbon source perturbation in Saccharomyces cerevisiae growing on galactose or ethanol. The color on the left side of the gene box illustrates mRNA changes; the color on the right indicates corresponding protein-level changes. (C) A variety of SNP parameters can be viewed simultaneously using the striped view. SNP distribution (dbSNP http://www.ncbi.nih.gov/SNP webcite), structure-based functional predictions (LS-SNP http://alto.compbio.ucsf.edu/LS-SNP/ webcite), and myocardial infarction (MI) association data are combined to asses the coverage of the SNP panel over a pathway depicting the role of statin drugs. To view the complete versions of these MAPPs with live backpages see Supplemental Data.
Salomonis et al. BMC Bioinformatics 2007 8:217 doi:10.1186/1471-2105-8-217