BMC Bioinformatics

official impact factor 3.03
Search for
Advanced search
BMC Bioinformatics
Tools
Share this article
Open Access

PILER-CR: Fast and accurate identification of CRISPR repeats

Robert C Edgar

BMC Bioinformatics 2007, 8:18 doi:10.1186/1471-2105-8-18

Accesses  

  • Last 30 days: 43 accesses
  • Last 365 days: 540 accesses
  • All time: 3494 accesses

Cited by

BioMed Central: 3 citations

Software   Open Access

CRISPR Recognition Tool (CRT): a tool for automatic detection of clustered regularly interspaced palindromic repeats

Charles Bland, Teresa L Ramsey, Fareedah Sabree, Micheal Lowe, Kyndall Brown, Nikos C Kyrpides, Philip Hugenholtz BMC Bioinformatics 2007, 8:209 (18 June 2007)

Abstract | Full text | PDF | PubMed | Cited on BioMed Central

Database   Open Access

The CRISPRdb database and tools to display CRISPRs and to generate dictionaries of spacers and repeats

Ibtissem Grissa, Gilles Vergnaud, Christine Pourcel BMC Bioinformatics 2007, 8:172 (23 May 2007)

Abstract | Full text | PDF | PubMed | Cited on BioMed Central

Research   Open Access

Evolutionary conservation of sequence and secondary structures in CRISPR repeats

Victor Kunin, Rotem Sorek, Philip Hugenholtz Genome Biology 2007, 8:R61 (18 April 2007)

Abstract | Full text | PDF | PubMed | Cited on BioMed Central |  Editor’s summary

The categorisation and structural analysis of Clustered Regularly Interspaced Short Palindromic Repeats (CRISPRs) sequences from 195 microbial genomes show that repeats from diverse organisms can be grouped based on sequence similarity, and that some groups have pronounced secondary structures with compensatory base changes.

Google Scholar: View citations

ISI Web of Science: View citations

PubMed Central: View citations