BMC Bioinformatics

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A computational survey of candidate exonic splicing enhancer motifs in the model plant Arabidopsis thaliana

Mihaela Pertea*, Stephen M Mount and Steven L Salzberg

BMC Bioinformatics 2007, 8:159 doi:10.1186/1471-2105-8-159

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Research article   Open Access

Effect of exonic splicing regulation on synonymous codon usage in alternatively spliced exons of Dscam

Aya Takahashi BMC Evolutionary Biology 2009, 9:214 (27 August 2009)

Research article   Open Access

Automatic detection of exonic splicing enhancers (ESEs) using SVMs

Britta Mersch, Alexander Gepperth, Sándor Suhai, Agnes Hotz-Wagenblatt BMC Bioinformatics 2008, 9:369 (10 September 2008)

Technical Note   Open Access

Calculation of Splicing Potential from the Alternative Splicing Mutation Database

Jason M Bechtel, Preeti Rajesh, Irina Ilikchyan, Ying Deng, Pankaj K Mishra, Qi Wang, Xiaochun Wu, Kirill A Afonin, William E Grose, Ye Wang, Sadik Khuder, Alexei Fedorov BMC Research Notes 2008, 1:4 (26 February 2008)

Data Note   Open Access

The Alternative Splicing Mutation Database: a hub for investigations of alternative splicing using mutational evidence

Jason M Bechtel, Preeti Rajesh, Irina Ilikchyan, Ying Deng, Pankaj K Mishra, Qi Wang, Xiaochun Wu, Kirill A Afonin, William E Grose, Ye Wang, Sadik Khuder, Alexei Fedorov BMC Research Notes 2008, 1:3 (26 February 2008)

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Proceedings   Open Access

Accurate splice site prediction using support vector machines

Sören Sonnenburg, Gabriele Schweikert, Petra Philips, Jonas Behr, Gunnar Rätsch BMC Bioinformatics 2007, 8(Suppl 10):S7 (21 December 2007)

Research article   Open Access

Features generated for computational splice-site prediction correspond to functional elements

Rezarta Dogan, Lise Getoor, W John Wilbur, Stephen M Mount BMC Bioinformatics 2007, 8:410 (24 October 2007)