Table 2 |
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|
Concepts representative for the cluster RAB27B, MYRIP, MLPH, RAB27A as given by Anni. |
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|
Weight in concept profile |
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|
|
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|
Concept Name |
Contribution (%) |
RAB27B |
MYRIP |
MLPH |
RAB27A |
|
|
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|
RAB27A |
52,17 |
0,61 |
0,74 |
0,73 |
1 |
|
MLPH |
11.16 |
- |
0,44 |
1 |
0,29 |
|
Myosin Type V |
7,22 |
0,04 |
0,68 |
0,4 |
0,22 |
|
Melanosomes |
6,7 |
0,12 |
0,3 |
0,47 |
0,27 |
|
RAB27B |
4,06 |
1 |
0,14 |
- |
0,11 |
|
MYRIP |
2,98 |
0,07 |
1 |
0,09 |
0,06 |
|
Melanocytes |
2,73 |
0,13 |
0,14 |
0,28 |
0,17 |
|
Myosins |
2,33 |
0,04 |
0,38 |
0,22 |
0,12 |
|
Myosin Heavy Chains |
1,72 |
- |
0,46 |
0,18 |
0,09 |
|
GTP Phosphohydrolases |
1,31 |
0,17 |
0,23 |
0,04 |
0,08 |
|
Actins |
1,17 |
0,05 |
0,32 |
0,12 |
0,06 |
|
Exocytosis |
0,87 |
0,08 |
0,12 |
0,08 |
0,12 |
|
Secretory Vesicles |
0,68 |
0,07 |
0,16 |
0,06 |
0,09 |
|
Carrier Proteins |
0,59 |
- |
0,11 |
0,17 |
0,09 |
|
Organelles |
0,54 |
0,11 |
- |
0,12 |
0,09 |
|
rab GTP-Binding Proteins |
0,52 |
0,16 |
- |
0,04 |
0,12 |
|
|
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|
In the first column the concept names are shown, in the second the percentage contribution of this concept to the average cosine score (0,57) of this group. We limited the number of concepts to a contribution of 0,5% to the average cosine score. The remaining columns show the weight of the concepts in the concept profiles of the genes whose names are shown in the column headings. These weights form the basis of the clustering of the 4 genes. |
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|
Jelier et al. BMC Bioinformatics 2007 8:14 doi:10.1186/1471-2105-8-14 |
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