Toward the automated generation of genome-scale metabolic networks in the SEED
-
* Corresponding author: Aaron Best best@hope.edu
BMC Bioinformatics 2007, 8:139 doi:10.1186/1471-2105-8-139
Accesses
- Last 30 days: 96 accesses
- Last 365 days: 917 accesses
- All time: 6221 accesses
Cited by
BioMed Central: 5 citations
|
Research
Genome-wide discovery of missing genes in biological pathways of prokaryotes Yong Chen, Fenglou Mao, Guojun Li, Ying Xu BMC Bioinformatics 2011, 12(Suppl 1):S1 (15 February 2011) |
|
Database
BiGG: a Biochemical Genetic and Genomic knowledgebase of large scale metabolic reconstructions Jan Schellenberger, Junyoung O Park, Tom M Conrad, Bernhard Ø Palsson BMC Bioinformatics 2010, 11:213 (29 April 2010) |
|
Research
iBsu1103: a new genome-scale metabolic model of Bacillus subtilis based on SEED annotations Christopher S Henry, Jenifer F Zinner, Matthew P Cohoon, Rick L Stevens Genome Biology 2009, 10:R69 (25 June 2009) A new and validated genome-scale metabolic model of Bacillus subtilis 168, iBsu1103, is presented that has significantly improved completeness and accuracy. |
|
Database
The RAST Server: Rapid Annotations using Subsystems Technology Ramy K Aziz, Daniela Bartels, Aaron A Best, Matthew DeJongh, Terrence Disz, Robert A Edwards, Kevin Formsma, Svetlana Gerdes, Elizabeth M Glass, Michael Kubal, Folker Meyer, Gary J Olsen, Robert Olson, Andrei L Osterman, Ross A Overbeek, Leslie K McNeil, Daniel Paarmann, Tobias Paczian, Bruce Parrello, Gordon D Pusch, Claudia Reich, Rick Stevens, Olga Vassieva, Veronika Vonstein, Andreas Wilke, Olga Zagnitko BMC Genomics 2008, 9:75 (8 February 2008) |