Table 1 |
||
|
Comparison of the best BLAST hit method and BranchClust algorithm. |
||
|
Number of taxa – A: Archaea B: Bacteria |
Number of selected families: |
|
|
|
||
|
Reciprocal best BLAST hit |
BranchClust |
|
|
|
||
|
2A2B |
80 |
414 (all complete) |
|
13B |
236 |
2066 (369 complete, 1690 with n ≥ 8) |
|
14A |
125 |
1431 (300 complete, 1131 with n ≥ 8) |
|
14B 16A |
12 |
195 (80 complete, 195 with n ≥ 24) |
|
|
||
|
Poptsova and Gogarten BMC Bioinformatics 2007 8:120 doi:10.1186/1471-2105-8-120 |
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