Table 2

Comparison of protein-protein interactions for a test set of proteins.


HPRD
BIND
DIP
MINT
IntAct
MIPS
PDZBase
Reactome

CASP3
126
15
0
6
3
0
0
1
CDK2
71
16
9
11
12
2
0
2
TBP
81
17
14
12
15
2
0
14
TNFRSF1A
43
11
8
77
74
1
0
1
YWHAB
116
12
4
83
6
1
0
2
GAPDH
37
6
0
20
19
0
0
0
RELA
98
13
13
103
90
1
0
2
HDAC1
114
13
5
14
12
1
0
0
RPS27
2
1
0
9
10
0
0
32
SKP1A
35
11
5
13
15
0
0
2
ACTC
32
2
0
1
2
0
0
0
PABPC1
23
3
0
11
6
0
0
2
VDAC1
16
4
0
2
0
2
0
0
THRB
35
11
0
0
2
2
0
0
HSPA8
42
5
0
42
40
0
0
0
PDZK1
17
0
0
3
4
0
1
0

Mathivanan et al. BMC Bioinformatics 2006 7(Suppl 5):S19   doi:10.1186/1471-2105-7-S5-S19