SVM-based prediction of caspase substrate cleavage sites

doi:10.1186/1471-2105-7-S5-S14

BMC Bioinformatics

Volume 7
Suppl 5

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This article is part of the supplement: APBioNet – Fifth International Conference on Bioinformatics (InCoB2006) .

Proceedings

SVM-based prediction of caspase substrate cleavage sites

Lawrence JK Wee¹ , Tin Wee Tan¹ and Shoba Ranganathan²^,1

¹Department of Biochemistry, Yong Loo Lin School of Medicine, National University of Singapore, Singapore

²Department of Chemistry and Biomolecular Sciences & Biotechnology Research Institute, Macquarie University, Sydney, Australia

author email corresponding author email

BMC Bioinformatics 2006, 7(Suppl 5):S14doi:10.1186/1471-2105-7-S5-S14


Published:	18 December 2006

Additional files

Additional File 1:

Dataset of caspase substrate cleavage sites (for cross-validation and SVM training). List of caspase substrate cleavage sites used for cross-validation and training of the SVM.

Format: DOC Size: 232KB Download file

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Additional File 2:

Dataset of caspase substrate cleavage sites (for independent out-of-sample testing). List of caspase substrate cleavage sites used for independent out-of-sample testing of the SVM method.

Format: DOC Size: 49KB Download file

This file can be viewed with: Microsoft Word Viewer