BMC Bioinformatics

official impact factor 3.03

Open Access Highly Access

Biclustering of gene expression data by non-smooth non-negative matrix factorization

Pedro Carmona-Saez, Roberto D Pascual-Marqui, F Tirado, Jose M Carazo and Alberto Pascual-Montano*

BMC Bioinformatics 2006, 7:78 doi:10.1186/1471-2105-7-78

Accesses  

  • Last 30 days: 121 accesses
  • Last 365 days: 1562 accesses
  • All time: 7790 accesses

Cited by

BioMed Central: 8 citations

Methodology article   Open Access Highly Accessed

A mixture model with a reference-based automatic selection of components for disease classification from protein and/or gene expression levels

Ivica Kopriva, Marko Filipović BMC Bioinformatics 2011, 12:496 (30 December 2011)

Proceedings   Open Access

Discovering gene functional relationships using FAUN (Feature Annotation Using Nonnegative matrix factorization)

Elina Tjioe, Michael W Berry, Ramin Homayouni BMC Bioinformatics 2010, 11(Suppl 6):S14 (7 October 2010)

Software   Open Access Highly Accessed

A flexible R package for nonnegative matrix factorization

Renaud Gaujoux, Cathal Seoighe BMC Bioinformatics 2010, 11:367 (2 July 2010)

Research article   Open Access Highly Accessed

Biclustering via optimal re-ordering of data matrices in systems biology: rigorous methods and comparative studies

Peter A DiMaggio, Scott R McAllister, Christodoulos A Floudas, Xiao-Jiang Feng, Joshua D Rabinowitz, Herschel A Rabitz BMC Bioinformatics 2008, 9:458 (27 October 2008)

Research article   Open Access

Application of nonnegative matrix factorization to improve profile-profile alignment features for fold recognition and remote homolog detection

Inkyung Jung, Jaehyung Lee, Soo-Young Lee, Dongsup Kim BMC Bioinformatics 2008, 9:298 (1 July 2008)

Methodology article   Open Access Highly Accessed

EDISA: extracting biclusters from multiple time-series of gene expression profiles

Jochen Supper, Martin Strauch, Dierk Wanke, Klaus Harter, Andreas Zell BMC Bioinformatics 2007, 8:334 (12 September 2007)

Methodology article   Open Access

HoughFeature, a novel method for assessing drug effects in three-color cDNA microarray experiments

Hongya Zhao, Hong Yan BMC Bioinformatics 2007, 8:256 (17 July 2007)

Software   Open Access Highly Accessed

bioNMF: a versatile tool for non-negative matrix factorization in biology

Alberto Pascual-Montano, Pedro Carmona-Saez, Monica Chagoyen, Francisco Tirado, Jose M Carazo, Roberto D Pascual-Marqui BMC Bioinformatics 2006, 7:366 (28 July 2006)