Table 3

Number of additional direction assignments required to eliminate remaining thermodynamically infeasible energy production

common attributes

standard procedure

standard procedure with consideration of final electron acceptors


quinone pool reductions

15

-

transporters

9

8

NTP production

14

12

NADH/NADPH production

5

4

O2 production

2

1

CO2 consumption

4

4

NMP synthesis

7

7

other

3

3


sum

59

39


Kümmel et al. BMC Bioinformatics 2006 7:512   doi:10.1186/1471-2105-7-512

Open Data