Table 1

Summary of SAGE tags for four SAGE libraries

Libraries*

L_AD

L_Ctrl

S_AD

S_Ctrl

(T_AD**)

(T_Ctrl)


Unique tags

34,475 (28,804)

30,581 (25,145)

25,140

23,126

No. total tag counts

80,292

75,018

78,126

70,456

No. SAGE tags

14,643 (24,129)

11,646 (20,640)

21,367

19,787

mapped to UNIGENE

No. orphan tags

19,832(4,675)

18,935(4,505)

3,773

3,339


* Library abbreviation is as the following: long SAGE AD (L_AD), tSAGE AD (T_AD), LongSAGE control (L_Ctrl), tSAGE control (T_Ctrl), ShortSAGE AD (S_AD); ShortSAGE control (S_Ctrl).

** The information of truncated long SAGE (tSAGE) libraries for AD and control are listed in the parenthesis.

Li et al. BMC Bioinformatics 2006 7:504   doi:10.1186/1471-2105-7-504

Open Data