Methodology article
A correlated motif approach for finding short linear motifs from protein interaction networks
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* Corresponding authors: Soon-Heng Tan chris.tan.sh@gmail.com - Willy Hugo hugowill@comp.nus.edu.sg
1 Knowledge Discovery Department, Institute for Infocomm Research, Singapore
2 Department of Computer Science, National University of Singapore, Singapore
3 Department of Information and Mathematical Science, Genome Institute of Singapore
4 Present address: Department of Medical Genetics and Microbiology, University of Toronto, Toronto, Canada
BMC Bioinformatics 2006, 7:502 doi:10.1186/1471-2105-7-502
Published: 16 November 2006Additional files
Additional file 1:
SupplementaryData-DetailsOnMotifExtractedOnTGF-Beta. The file contains detailed description on the motif instance set pair extracted by D-STAR and the corresponding known Phosphorylation motifs that is found enriched in one of the set.
Format: PDF Size: 141KB Download file
This file can be viewed with: Adobe Acrobat Reader
Additional file 2:
Program. The file contains the binaries of the C implementation of D-STAR for Windows XP, Linux and Solaris OS. Also included in the zip file are the C2-BIND dataset as sample input and its sample output file.
Format: ZIP Size: 136KB Download file