Table 2 |
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|
The list of class II MHC alleles for which SVRMHC models have been constructed. |
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|
MHC allele |
Linear, 11-factor |
Linear, Sparse |
Polynomial, 11-factor |
Polynomial, Sparse |
RBF, 11-factor |
RBF, Sparse |
|
|
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|
DRB1*0401 |
0.526 |
0.556 |
0.551 |
0.612 |
0.582 |
0.61 |
|
DRB1*0101 |
0.531 |
0.5 |
0.568 |
0.616 |
0.634 |
0.61 |
|
DRB1*1501 |
0.659 |
0.622 |
0.703 |
0.693 |
0.7078 |
0.671 |
|
DQA1*0501 |
0.456 |
0.568 |
0.529 |
0.581 |
0.546 |
0.537 |
|
DRB1*0405 |
0.249 |
0.48 |
0.364 |
0.415 |
0.295 |
0.412 |
|
DRB5*0101 |
0.408 |
0.479 |
0.391 |
0.589 |
0.374 |
0.532 |
|
|
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|
The table also includes statistics of performance for the models (expressed in cross-validated r) for various configurations of parameters. The configurations offering the best performance are marked in bold, and these are the models implemented in the SVRMHC server. |
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|
Wan et al. BMC Bioinformatics 2006 7:463 doi:10.1186/1471-2105-7-463 |
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