GOLEM: an interactive graph-based gene-ontology navigation and analysis tool
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* Corresponding author: Olga G Troyanskaya ogt@cs.princeton.edu
BMC Bioinformatics 2006, 7:443 doi:10.1186/1471-2105-7-443
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BioMed Central: 5 citations
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Methodology article
GO-based Functional Dissimilarity of Gene Sets Norberto Díaz-Díaz, Jesús S Aguilar-Ruiz BMC Bioinformatics 2011, 12:360 (1 September 2011) |
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Research
Simon M Dittami, Delphine Scornet, Jean-Louis Petit, Béatrice Ségurens, Corinne Da Silva, Erwan Corre, Michael Dondrup, Karl-Heinz Glatting, Rainer König, Lieven Sterck, Pierre Rouzé, Yves Van de Peer, J Mark Cock, Catherine Boyen, Thierry Tonon Genome Biology 2009, 10:R66 (16 June 2009) The brown alga |
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Software
GOrilla: a tool for discovery and visualization of enriched GO terms in ranked gene lists Eran Eden, Roy Navon, Israel Steinfeld, Doron Lipson, Zohar Yakhini BMC Bioinformatics 2009, 10:48 (3 February 2009) |
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Software
ProbCD: enrichment analysis accounting for categorization uncertainty Ricardo ZN Vêncio, Ilya Shmulevich BMC Bioinformatics 2007, 8:383 (12 October 2007) |
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Research
Daniel L Miller, Chad L Myers, Brenden Rickards, Hilary A Coller, S Jane Flint Genome Biology 2007, 8:R58 (12 April 2007) The effects of the adenovirus Ad5 on basic host cell programs, such as cell-cycle regulation, were studied in a microarray analysis of human fibroblasts. About 2,000 genes were up- or down-regulated after Ad5 infection and Ad5 infection was shown to induce reversal of the quiescence program and recapitulation of the core serum response. |