BMC Bioinformatics

official impact factor 3.03

Open Access Highly Access Methodology article

SynTReN: a generator of synthetic gene expression data for design and analysis of structure learning algorithms

Tim Van den Bulcke1, Koenraad Van Leemput2, Bart Naudts2, Piet van Remortel2, Hongwu Ma3, Alain Verschoren2, Bart De Moor1 and Kathleen Marchal1,4*

Author Affiliations

1 ESAT-SCD, K.U.Leuven, Kasteelpark Arenberg 10, B-3001 Heverlee, Belgium

2 ISLab, Dept. Math. and Comp. Sc., University of Antwerp, Middelheimlaan 1, B-2020 Antwerpen, Belgium

3 Dept. of Genome Analysis, German Research Center for Biotechnology, Mascheroder Weg 1, D-38124 Braunschweig, Germany

4 CMPG, Dept. Microbial and Molecular Systems, K.U.Leuven, Kasteelpark Arenberg 20, B-3001 Heverlee, Belgium

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BMC Bioinformatics 2006, 7:43 doi:10.1186/1471-2105-7-43

Published: 26 January 2006

Additional files

Additional File 1:

Topological measures, types of random networks and interaction types.

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Additional File 2:

Variation of topological measures in function of the number of nodes.

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Additional File 3:

Software implementation of network generator (Java).

Format: ZIP Size: 1.6MB Download file

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