BMC Bioinformatics

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AMDA: an R package for the automated microarray data analysis

Mattia Pelizzola, Norman Pavelka, Maria Foti and Paola Ricciardi-Castagnoli*

BMC Bioinformatics 2006, 7:335 doi:10.1186/1471-2105-7-335

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Mural granulosa cell gene expression associated with oocyte developmental competence

Jin-Yi Jiang, Huiling Xiong, Mingju Cao, Xuhua Xia, Marc-Andre Sirard, Benjamin K Tsang Journal of Ovarian Research 2010, 3:6 (6 March 2010)

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GeneTrailExpress: a web-based pipeline for the statistical evaluation of microarray experiments

Andreas Keller, Christina Backes, Maher Al-Awadhi, Andreas Gerasch, Jan Küntzer, Oliver Kohlbacher, Michael Kaufmann, Hans-Peter Lenhof BMC Bioinformatics 2008, 9:552 (22 December 2008)

Short Report   Open Access

Advanced spot quality analysis in two-colour microarray experiments

Mikalai Yatskou, Eugene Novikov, Guillaume Vetter, Arnaud Muller, Emmanuel Barillot, Laurent Vallar, Evelyne Friederich BMC Research Notes 2008, 1:80 (17 September 2008)

This article is part of a collection on Microarray normalization...

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The Annotation, Mapping, Expression and Network (AMEN) suite of tools for molecular systems biology

Frédéric Chalmel, Michael Primig BMC Bioinformatics 2008, 9:86 (6 February 2008)

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Genome Expression Pathway Analysis Tool – Analysis and visualization of microarray gene expression data under genomic, proteomic and metabolic context

Markus Weniger, Julia C Engelmann, Jörg Schultz BMC Bioinformatics 2007, 8:179 (2 June 2007)

Research article   Open Access

Correlation-maximizing surrogate gene space for visual mining of gene expression patterns in developing barley endosperm tissue

Marc Strickert, Nese Sreenivasulu, Björn Usadel, Udo Seiffert BMC Bioinformatics 2007, 8:165 (22 May 2007)

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PageMan: An interactive ontology tool to generate, display, and annotate overview graphs for profiling experiments

Björn Usadel, Axel Nagel, Dirk Steinhauser, Yves Gibon, Oliver E Bläsing, Henning Redestig, Nese Sreenivasulu, Leonard Krall, Matthew A Hannah, Fabien Poree, Alisdair R Fernie, Mark Stitt BMC Bioinformatics 2006, 7:535 (18 December 2006)