Computational expression deconvolution in a complex mammalian organ
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* Corresponding author: Lewis A Chodosh chodosh@mail.med.upenn.edu
- † Equal contributors
BMC Bioinformatics 2006, 7:328 doi:10.1186/1471-2105-7-328
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BioMed Central: 7 citations
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Research article
Rathi D Thiagarajan, Nicole Cloonan, Brooke B Gardiner, Tim R Mercer, Gabriel Kolle, Ehsan Nourbakhsh, Shivangi Wani, Dave Tang, Keerthana Krishnan, Kylie M Georgas, Bree A Rumballe, Han S Chiu, Jason A Steen, John S Mattick, Melissa H Little, Sean M Grimmond BMC Genomics 2011, 12:441 (5 September 2011) |
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Research article
Fathi Elloumi, Zhiyuan Hu, Yan Li, Joel S Parker, Margaret L Gulley, Keith D Amos, Melissa A Troester BMC Medical Genomics 2011, 4:54 (30 June 2011) |
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Review
Assessing the human immune system through blood transcriptomics Damien Chaussabel, Virginia Pascual, Jacques Banchereau BMC Biology 2010, 8:84 (1 July 2010) This article is part of a collection on Hope of progress Chaussabel and colleagues review the contributions of blood transcriptomics to identifying therapeutically relevant signatures of autoimmune and infectious disease, and the challenges of developing this approach into a mainstream tool.
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Research article
Cecilia Williams, Luisa Helguero, Karin Edvardsson, Lars-Arne Haldosén, Jan-Åke Gustafsson Breast Cancer Research 2009, 11:R26 (8 May 2009) |
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Method
Zhandong Liu, Min Wang, James V Alvarez, Megan E Bonney, Chien-chung Chen, Celina D'Cruz, Tien-chi Pan, Mahlet G Tadesse, Lewis A Chodosh Genome Biology 2008, 9:R180 (18 December 2008) Singular value decomposition regression can detect the activation of endogenous signaling pathways, allowing the identification of pathway cross-talk. |
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Research article
Gene networks driving bovine milk fat synthesis during the lactation cycle Massimo Bionaz, Juan J Loor BMC Genomics 2008, 9:366 (31 July 2008) |
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Research article
The brown adipocyte differentiation pathway in birds: An evolutionary road not taken Nadejda V Mezentseva, Jaliya S Kumaratilake, Stuart A Newman BMC Biology 2008, 6:17 (21 April 2008) Although birds do not have thermogenic brown adipose tissue, the developmental pathway for brown fat differentiation is still present and can be induced, indicating that brown fat evolved in a common ancestor of birds and mammals.
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