Table 1

Genomes included in this study

Accessiona
Name
Length (nt)
# of genes annotateda
# of ORFsb >30 aa

BA000004
Bacillus halodurans strain C-125
4202352
4066
73839
BSXX
Bacillus subtilis subsp. subtilis str. 168
4214630
4106
75310
AE000783
Borrelia burgdorferi str. B31
910724
850
10756
AE001273
Chlamydia trachomatis strain D/UW-3/CX
1042519
894
17211
AE001363
Chlamydophila pneumoniae CWL029
1230230
1052
19259
AE001437
Clostridium acetobutylicum strain ATCC 824
3940880
3672
48244
BA000016
Clostridium perfringens str. 13
3031430
2660
31417
U00096
Escherichia coli K12
4639221
4289
86919
AE005174
Escherichia coli O157:H7 EDL933
5528970
5349
102747
L42023
Haemophilus influenzae Rd KW20
1830138
1709
27756
AE001439
Helicobacter pylori J99
1643831
1491
21997
AL591824
Listeria monocytogenes
2944528
2855
45146
AE015450
Mycoplasma gallisepticum str. R
996422
726
13506
L43967
Mycoplasma genitalium strain G-37
580074
480
8058
AE017308
Mycoplasma mobile strain 163K
777079
633
10241
BX293980
Mycoplasma mycoides subsp. mycoides SC
1211703
1016
14127
BA000026
Mycoplasma penetrans strain HF-2
1358633
1037
17111
U00089
Mycoplasma pneumoniae strain M129
816394
688
13868
MPUABCTIP
Mycoplasma pulmonis (Sabin 1941) Freundt 1955
963879
782
13324
AE002098
Neisseria meningitidis serogroup B strain MC58
2272351
2025
42660
AE004091
Pseudomonas aeruginosa str. PAO1
6264403
5566
92461
RPXX
Rickettsia prowazekii da Rocha-Lima 1916
1111523
834
12029
STYPHCT18
Salmonella enterica subsp. enterica serovar Typhi
4809037
4600
90974
AE007317
Streptococcus pneumoniae str. R6
2038615
2043
31733
AE000520
Treponema pallidum subsp. pallidum str. Nichols
1138011
1031
21937
AF222894
Ureaplasma urealyticum biovar 2
751719
611
9173
AE003852
Vibrio cholerae serotype O1 biotype ElTor strain N16961
2961149
2736
53378
AE003853
Vibrio cholerae serotype O1 biotype ElTor strain N16961
1072315
1092
19506

aAccessions and annotated genes reference Genome Reviews version 25.0

Powell and Hutchison BMC Bioinformatics 2006 7:31   doi:10.1186/1471-2105-7-31