Improving the specificity of high-throughput ortholog prediction
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* Corresponding author: Fiona SL Brinkman brinkman@sfu.ca
- † Equal contributors
BMC Bioinformatics 2006, 7:270 doi:10.1186/1471-2105-7-270
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Cited by
BioMed Central: 7 citations
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Research article
Raffaele Mazza, Francesco Strozzi, Andrea Caprera, Paolo Ajmone-Marsan, John L Williams BMC Genomics 2009, 10:604 (14 December 2009) |
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Research article
Comparative transcriptomics in the Triticeae Andreas W Schreiber, Tim Sutton, Rico A Caldo, Elena Kalashyan, Ben Lovell, Gwenda Mayo, Gary J Muehlbauer, Arnis Druka, Robbie Waugh, Roger P Wise, Peter Langridge, Ute Baumann BMC Genomics 2009, 10:285 (29 June 2009) |
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Research
The bovine lactation genome: insights into the evolution of mammalian milk Danielle G Lemay, David J Lynn, William F Martin, Margaret C Neville, Theresa M Casey, Gonzalo Rincon, Evgenia V Kriventseva, Wesley C Barris, Angie S Hinrichs, Adrian J Molenaar, Katherine S Pollard, Nauman J Maqbool, Kuljeet Singh, Regan Murney, Evgeny M Zdobnov, Ross L Tellam, Juan F Medrano, J Bruce German, Monique Rijnkels Genome Biology 2009, 10:R43 (24 April 2009) This article is part of a collection on Bovine: the companion... Comparison of milk protein and mammary genes in the bovine genome with those from other mammals gives insights into the evolution of lactation. |
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Software
PSAT: A web tool to compare genomic neighborhoods of multiple prokaryotic genomes Christine Fong, Laurence Rohmer, Matthew Radey, Michael Wasnick, Mitchell J Brittnacher BMC Bioinformatics 2008, 9:170 (26 March 2008) |
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Database
MADIBA: A web server toolkit for biological interpretation of Plasmodium and plant gene clusters Philip J Law, Clotilde Claudel-Renard, Fourie Joubert, Abraham I Louw, Dave K Berger BMC Genomics 2008, 9:105 (28 February 2008) |
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Research article
Assessing the evolutionary rate of positional orthologous genes in prokaryotes using synteny data Frédéric Lemoine, Olivier Lespinet, Bernard Labedan BMC Evolutionary Biology 2007, 7:237 (29 November 2007) |
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Methodology article
BranchClust: a phylogenetic algorithm for selecting gene families Maria S Poptsova, J Peter Gogarten BMC Bioinformatics 2007, 8:120 (10 April 2007) A new algorithm, BranchClust, automates the finding of gene families by phylogenetic methods, outperforming sequence-similarity methods in recognizing orthologs and paralogs in an unrestricted number of taxa, a task previously difficult to automate.
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