Research  

Central nervous system gene expression changes in a transgenic mouse model for bovine spongiform encephalopathy

Raül Tortosa, Xavier Castells, Enric Vidal, Carme Costa, María Ruiz de Villa, Àlex Sánchez, Anna Barceló, Juan Torres, Martí Pumarola, Joaquín Ariño Veterinary Research 2011, 42:109 (28 October 2011)

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Methodology article  

Modeling measurement error in tumor characterization studies

Cyril Rakovski, Daniel J Weisenberger, Paul Marjoram, Peter W Laird, Kimberly D Siegmund BMC Bioinformatics 2011, 12:284 (13 July 2011)

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Research article  

Transcriptome analyses of mouse and human mammary cell subpopulations reveal multiple conserved genes and pathways

Elgene Lim, Di Wu, Bhupinder Pal, Toula Bouras, Marie-Liesse Asselin-Labat, François Vaillant, Hideo Yagita, Geoffrey J Lindeman, Gordon K Smyth, Jane E Visvader Breast Cancer Research 2010, 12:R21 (26 March 2010)

Abstract | Full text | PDF | PubMed | Cited on BioMed Central | F1000 Biology

Research article  

Unsupervised assessment of microarray data quality using a Gaussian mixture model

Brian E Howard, Beate Sick, Steffen Heber BMC Bioinformatics 2009, 10:191 (22 June 2009)

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Research  

Modulation of gene expression in drug resistant Leishmania is associated with gene amplification, gene deletion and chromosome aneuploidy

Jean-Michel Ubeda, Danielle Légaré, Frédéric Raymond, Amin Ouameur, Sébastien Boisvert, Philippe Rigault, Jacques Corbeil, Michel J Tremblay, Martin Olivier, Barbara Papadopoulou, Marc Ouellette Genome Biology 2008, 9:R115 (18 July 2008)

Abstract | Full text | PDF | PubMed |  Editor’s summary

Research article  

Genome-wide gene expression profiling analysis of Leishmania major and Leishmania infantum developmental stages reveals substantial differences between the two species

Annie Rochette, Frédéric Raymond, Jean-Michel Ubeda, Martin Smith, Nadine Messier, Sébastien Boisvert, Philippe Rigault, Jacques Corbeil, Marc Ouellette, Barbara Papadopoulou BMC Genomics 2008, 9:255 (29 May 2008)

Abstract | Full text | PDF | PubMed | Cited on BioMed Central

Research article  

Evaluation of time profile reconstruction from complex two-color microarray designs

Ana C Fierro, Raphael Thuret, Kristof Engelen, Gilles Bernot, Kathleen Marchal, Nicolas Pollet BMC Bioinformatics 2008, 9:1 (3 January 2008)

Abstract | Full text | PDF | PubMed | Cited on BioMed Central

Methodology article  

Weighted analysis of general microarray experiments

Anders Sjögren, Erik Kristiansson, Mats Rudemo, Olle Nerman BMC Bioinformatics 2007, 8:387 (15 October 2007)

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Methodology article  

Statistical analysis of an RNA titration series evaluates microarray precision and sensitivity on a whole-array basis

Andrew J Holloway, Alicia Oshlack, Dileepa S Diyagama, David DL Bowtell, Gordon K Smyth BMC Bioinformatics 2006, 7:511 (22 November 2006)

Abstract | Full text | PDF | PubMed | Cited on BioMed Central