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Bounded search for de novo identification of degenerate cis-regulatory elements

Jonathan M Carlson†, Arijit Chakravarty†, Radhika S Khetani and Robert H Gross*

BMC Bioinformatics 2006, 7:254 doi:10.1186/1471-2105-7-254

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Research article   Open Access

Topological comparison of methods for predicting transcriptional cooperativity in yeast

Daniel Aguilar, Baldo Oliva BMC Genomics 2008, 9:137 (25 March 2008)

Abstract | Full text | PDF | PubMed | Cited on BioMed Central

Methodology article   Open Access

A novel ensemble learning method for de novo computational identification of DNA binding sites

Arijit Chakravarty, Jonathan M Carlson, Radhika S Khetani, Robert H Gross BMC Bioinformatics 2007, 8:249 (12 July 2007)

Abstract | Full text | PDF | PubMed | Cited on BioMed Central

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