Table 7

Performance results for contact map prediction. Contact threshold: 12 Å. Accuracy and coverage (as %) for 12 Å contact map predictor for distance separations greater than 5, 11 and 23 amino acids, when the top N/5 and top N/2 contacts are considered (where N is the length of the protein).

|i - j| ≥ 6

|i - j| ≥ 12

|i - j| ≥ 24


N/5

N/2

N/5

N/2

N/5

N/2


P

R

P

R

P

R

P

R

P

R

P

R


MA

79.6

2.0

71.9

4.6

50.1

1.6

46.2

3.8

43.3

1.9

38.1

4.2

MA_PE

87.5

2.2

81.6

5.2

59.8

1.9

54.1

4.4

47.9

2.1

42.4

4.7

MA_SS_ACC

89.7

2.3

85.3

5.5

61.3

2.0

54.9

4.5

43.7

1.9

39.4

4.4

MA_SS_ACC_PE

89.9

2.3

85.5

5.5

62.5

2.0

55.6

4.6

49.9

2.2

43.8

4.9


Vullo et al. BMC Bioinformatics 2006 7:180   doi:10.1186/1471-2105-7-180

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