BMC Bioinformatics

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GEM System: automatic prototyping of cell-wide metabolic pathway models from genomes

Kazuharu Arakawa, Yohei Yamada, Kosaku Shinoda, Yoichi Nakayama and Masaru Tomita*

BMC Bioinformatics 2006, 7:168 doi:10.1186/1471-2105-7-168

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Toward the automated generation of genome-scale metabolic networks in the SEED

Matthew DeJongh, Kevin Formsma, Paul Boillot, John Gould, Matthew Rycenga, Aaron Best BMC Bioinformatics 2007, 8:139 (26 April 2007)