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Domain-based small molecule binding site annotation

Kevin A Snyder1, Howard J Feldman1, Michel Dumontier12, John J Salama1 and Christopher WV Hogue13*

Author Affiliations

1 The Blueprint Initiative, 200 Elm St., Suite 101, Toronto ON, M5T 1K4, Canada

2 Department of Biology, Carleton University, 1125 Colonel By Drive, Ottawa ON, K1S 5B6, Canada

3 Samuel Lunenfeld Research Institute, Room 1060, Mount Sinai Hospital, 600 University Ave., Toronto, Ontario, M5G 1X5, Canada

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BMC Bioinformatics 2006, 7:152  doi:10.1186/1471-2105-7-152

Published: 17 March 2006

Additional files

Additional File 1:

Definition lines of TrpRS sequences used in Table 3

Format: TXT Size: 8KB Download file

Open Data

Additional File 2:

Definition lines of TyrRS sequences used in Table 3

Format: TXT Size: 8KB Download file

Open Data

Additional File 3:

Non-biological small molecule filter list used by MMDBBIND

Format: TXT Size: 1KB Download file

Open Data

Additional File 4:

PDB identifiers and chains for the SMID-BLAST validation test set

Format: TXT Size: 5KB Download file

Open Data