A computational approach to discovering the functions of bacterial phytochromes by analysis of homolog distributions

Additional File 1:

Sorted list of co-distribution results based on a low E-value global BLAST analysis, A. tumefaciens phytochrome Agp1 as query and all A. tumefaciens proteins as target.

Format: XLS Size: 712KB Download file

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Additional File 2:

Sorted list of co-distribution results based on a high E-value global BLAST analysis, A. tumefaciens phytochrome Agp1 as query and all A. tumefaciens proteins as target.

Format: XLS Size: 715KB Download file

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Additional File 3:

Sorted list of co-distribution results based on a low E-value global BLAST analysis, A. tumefaciens phytochrome Agp2 as query and all A. tumefaciens proteins as target.

Format: XLS Size: 715KB Download file

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Additional File 4:

Sorted list of co-distribution results based on a high E-value global BLAST analysis, A. tumefaciens phytochrome Agp2 as query and all A. tumefaciens proteins as target.

Format: XLS Size: 714KB Download file

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Additional File 5:

Sorted list of co-distribution results based on a low E-value global BLAST analysis, A. tumefaciens response regulator AgR as query and all A. tumefaciens proteins as target.

Format: XLS Size: 711KB Download file

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Additional File 6:

Sorted list of co-distribution results based on a high E-value global BLAST analysis, A. tumefaciens response regulator AgR as query and all A. tumefaciens proteins as target.

Format: XLS Size: 716KB Download file

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Additional File 7:

Sorted list of co-distribution results based on a low E-value global BLAST analysis, A. tumefaciens response regulator ExsF as query and all A. tumefaciens proteins as target.

Format: XLS Size: 715KB Download file

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Additional File 8:

Sorted list of co-distribution results based on a high E-value global BLAST analysis, A. tumefaciens response regulator ExsF as query and all A. tumefaciens proteins as target.

Format: XLS Size: 716KB Download file

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Additional File 9:

Sorted list of co-distribution results based on a low E-value global BLAST analysis, A. tumefaciens histidine kinase ExsG as query and all A. tumefaciens proteins as target.

Format: XLS Size: 718KB Download file

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Additional File 10:

Sorted list of co-distribution results based on a high E-value global BLAST analysis, A. tumefaciens histidine kinase ExsG as query and all A. tumefaciens proteins as target.

Format: XLS Size: 718KB Download file

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Additional File 11:

Sorted list of co-distribution results based on a low E-value global BLAST analysis, D. radiodurans phytochrome BphP as query and all D. radiodurans proteins as target.

Format: XLS Size: 460KB Download file

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Additional File 12:

Sorted list of co-distribution results based on a high E-value global BLAST analysis, D. radiodurans phytochrome BphP as query and all D. radiodurans proteins as target.

Format: XLS Size: 460KB Download file

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Additional File 13:

Sorted list of co-distribution results based on a low E-value global BLAST analysis, P. aeruginosa phytochrome BphP as query and all P. aeruginosa proteins as target.

Format: XLS Size: 754KB Download file

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Additional File 14:

Sorted list of co-distribution results based on a high E-value global BLAST analysis, P. aeruginosa phytochrome BphP as query and all P. aeruginosa proteins as target.

Format: XLS Size: 756KB Download file

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Additional File 15:

Sorted list of co-distribution results based on a low E-value global BLAST analysis, Synechocystis PCC 6803 phytochrome Cph1 as query and all Synechocystis proteins as target.

Format: XLS Size: 436KB Download file

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Additional File 16:

Sorted list of co-distribution results based on a high E-value global BLAST analysis, Synechocystis PCC 6803 phytochrome Cph1 as query and all Synechocystis proteins as target.

Format: XLS Size: 438KB Download file

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Additional File 17:

Sorted list of co-distribution results based on a low E-value global BLAST analysis, the Synechocystis PCC 6803 photosynthesis protein D1 as query and all Synechocystis proteins as target.

Format: XLS Size: 436KB Download file

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Additional File 18:

Sorted list of co-distribution results based on a high E-value global BLAST analysis, the Synechocystis PCC 6803 photosynthesis protein D1 as query and all Synechocystis proteins as target.

Format: XLS Size: 439KB Download file

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Additional File 19:

Sorted list of co-distribution results based on a low E-value global BLAST analysis, Synechocystis PCC 6803 response regulator Rcp1 as query and all Synechocystis proteins as target.

Format: XLS Size: 437KB Download file

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Additional File 20:

Sorted list of co-distribution results based on a high E-value global BLAST analysis, Synechocystis PCC 6803 response regulator Rcp1 as query and all Synechocystis proteins as target.

Format: XLS Size: 438KB Download file

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Additional File 21:

Species names of all 138 bacteria used for the co-distribution analysis.

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