|
The 40 first ranking reactions when applying the feature extraction directly without any network information. |
|||||
| Rank |
reaction id (EcoCyc) |
corresponding enzyme |
regulation |
p-value |
involved in extracted sub-graph |
|
|
|||||
| 1 |
TRANS-RXN-1 |
transporter |
1 |
4.5e-20 |
1,2,5,6 |
| 2 |
PYRUVFORMLY-RXN |
pyruvate formate-lyase |
1 |
2.2e-18 |
1,2,5,6 |
| 3 |
GCVT-RXN |
aminomethyltransferase |
-1 |
2.8e-18 |
none |
| 4 |
FHLMULTI-RXN |
formate hydrogenlyase complex |
1 |
3.8e-16 |
1,2,5 |
| 5 |
2PGADEHYDRAT-RXN |
enolase |
1 |
5.1e-15 |
none |
| 6 |
GCVP-RXN |
glycine dehydrogenase (decarboxylating) |
-1 |
6.3e-15 |
none |
| 7 |
3-CH3-2-OXOBUTANOATE-OH- CH3-XFER-RXN |
3-methyl-2-oxobutanoate hydroxymethyltransferase |
1 |
7.1e-15 |
none |
| 8 |
PEPDEPHOS-RXN |
pyruvate kinase I |
1 |
9.1e-15 |
none |
| 9 |
PFLDEACTIV-RXN |
PFL-deactivase |
1 |
3.0e-14 |
none |
| 10 |
ACETALD-DEHYDROG-RXN |
acetaldehyde dehydrogenase |
1 |
3.0e-14 |
none |
| 11 |
FORMATEDEHYDROG-RXN |
formate dehydrogenase |
1 |
3.7e-14 |
none |
| 12 |
GCVMULTI-RXN |
gcv system |
-1 |
7.7e-14 |
none |
| 13 |
NACMURLALAAMI-RXN |
N-acetylmuramyl-L-alanine amidase |
1 |
8.6e-14 |
none |
| 14 |
R601-RXN |
fumarate reductase |
1 |
1.1e-13 |
none |
| 15 |
MANNONDEHYDRAT-RXN |
mannonate dehydratase |
-1 |
2.0e-13 |
none |
| 16 |
GLUTDEHYD-RXN |
glutamate dehydrogenase (NADP+) |
1 |
2.8e-13 |
none |
| 17 |
1.97.1.4-A-RXN |
pyruvate formate-lyase activating enzyme |
1 |
4.8e-13 |
none |
| 18 |
TDCEACT1-RXN |
pyruvate formate-lyase activating enzyme |
1 |
4.8e-13 |
none |
| 19 |
GLUTRNAREDUCT-RXN |
glutamyl-tRNA reductase |
1 |
1.4e-12 |
none |
| 20 |
HISTAMINOTRANS-RXN |
histidine-phosphate aminotransferase |
1 |
1.7e-12 |
none |
| 21 |
TRIOSEPISOMERIZATION-RXN |
triose phosphate isomerase |
1 |
1.9e-12 |
9 |
| 22 |
MANNPISOM-RXN |
mannose-6-phosphate isomerase |
1 |
4.5e-12 |
none |
| 23 |
NAD-KIN-RXN |
putative NAD+ kinase |
1 |
4.7e-12 |
none |
| 24 |
6PFRUCTPHOS-RXN |
6-phosphofructokinase-1 |
1 |
4.7e-12 |
none |
| 25 |
4OH2OXOGLUTARALDOL-RXN |
2-keto-4-hydroxyglutarate aldolase |
1 |
6.0e-12 |
none |
| 26 |
KDPGALDOL-RXN |
2-keto-3-deoxy-6-phosphogluconate aldolase |
1 |
6.0e-12 |
none |
| 27 |
OXALODECARB-RXN |
oxaloacetate decarboxylase |
1 |
6.0e-12 |
none |
| 28 |
ABC-26-RXN |
tranport |
-1 |
8.2e-12 |
none |
| 29 |
RXN0-2181 |
asparaginase III |
-1 |
1.4e-11 |
none |
| 30 |
RXN0-1682 |
asparaginase III |
-1 |
1.4e-11 |
none |
| 31 |
RXN0-307 |
NADH oxidoreductase |
1 |
1.8e-11 |
none |
| 32 |
RXN0-1565 |
tRNA (Gm18) 2'-O-methyltransferase |
-1 |
2.5e-11 |
none |
| 33 |
TRANS-RXN-242A |
Transporter |
1 |
3.0e-11 |
none |
| 34 |
PHOSICITDEHASE-RXN |
isocitrate dehydrogenase kinase |
-1 |
3.1e-11 |
none |
| 35 |
DEPHOSICITDEHASE-RXN |
isocitrate dehydrogenase phosphatase |
-1 |
3.1e-11 |
none |
König et al. BMC Bioinformatics 2006 7:119 doi:10.1186/1471-2105-7-119 |
|||||