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Results of the BioCreative competition. Summary of submitted search runs. The table contains details of parameter sets (D# denotes disambiguation threshold, O(+/-) use of organism disambiguation, S(+/-) significance of dash at end of synonym) and resulting performance. Values where ProMiner achieved the best rank of all participants are printed in bold. |
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| Fly |
Mouse |
Yeast |
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| 1 |
2 |
3 |
1 |
2 |
3 |
1 |
2 |
|
|
|
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| Disambiguation (D#) |
D3 |
D1 |
D3 |
D3 |
D1 |
D5 |
D3 |
D1 |
| Organism O(+/-) |
O+ |
O+ |
O+ |
O- |
O+ |
O- |
O- |
O- |
| Dash significance S(+/-) |
S- |
S+ |
S+ |
S- |
S+ |
S+ |
S- |
S- |
| F-measure |
0.781 |
0.816 |
0.787 |
0.771 |
0.776 |
0.79 |
0.897 |
0.899 |
| Precision |
0.728 |
0.831 |
0.744 |
0.752 |
0.809 |
0.766 |
0.951 |
0.966 |
| Recall |
0.841 |
0.8 |
0.834 |
0.79 |
0.746 |
0.814 |
0.848 |
0.84 |
Hanisch et al. BMC Bioinformatics 2005 6(Suppl 1):S14 doi:10.1186/1471-2105-6-S1-S14 |
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