|
Hypothesis testing results |
||||||
| Probe |
Mean (group1, Raw data) |
Mean (group2, Raw data) |
Fold change |
t (Equal variance t-test) |
p-value (Equal variance t-test) |
PTP, unrestricted (Equal variance t-test) |
|
|
||||||
| AFFX-MurIL2_at |
105.16 |
200.34 |
1.905097 |
-0.81193 |
0.440318 |
0.226179 |
|
|
||||||
| AFFX-MurIL10_at |
176.52 |
253.58 |
1.436551 |
-0.49777 |
0.632041 |
0.194216 |
|
|
||||||
| AFFX-MurIL4_at |
146.56 |
197.86 |
1.350027 |
-0.05477 |
0.957668 |
0.147303 |
|
|
||||||
| AFFX-MurFAS_at |
670.06 |
487.42 |
0.727427 |
2.264698 |
0.05333 |
0.32061 |
|
|
||||||
| AFFX-BioB-5_at |
4074.98 |
5165.36 |
1.267579 |
-1.10225 |
0.302405 |
0.251946 |
|
|
||||||
| AFFX-BioB-M_at |
10258.4 |
12376.04 |
1.20643 |
-0.85246 |
0.418745 |
0.230018 |
|
|
||||||
| AFFX-BioB-3_at |
5600.76 |
6784.9 |
1.211425 |
-0.82656 |
0.432446 |
0.227573 |
|
|
||||||
| AFFX-BioC-5_at |
15688.4 |
17406.88 |
1.109538 |
-0.23558 |
0.819676 |
0.16602 |
|
|
||||||
| AFFX-BioC-3_at |
11812.54 |
13288.74 |
1.124969 |
-0.2571 |
0.803593 |
0.168321 |
|
|
||||||
| AFFX-BioDn-3_at |
65025.2 |
68451.72 |
1.052695 |
0.467328 |
0.65273 |
0.190965 |
|
|
||||||
| AFFX-CreX-5_at |
124944.9 |
152682.8 |
1.222001 |
-0.39488 |
0.70325 |
0.183174 |
|
|
||||||
| AFFX-CreX-3_at |
166352 |
192790.6 |
1.158932 |
-0.26323 |
0.799024 |
0.168979 |
|
|
||||||
| AFFX-BioB-5_st |
611.6 |
677.8 |
1.108241 |
0.280987 |
0.785851 |
0.170886 |
|
|
||||||
| AFFX-BioB-M_st |
556.26 |
779.84 |
1.401934 |
-1.1822 |
0.27107 |
0.25832 |
|
|
||||||
| AFFX-BioB-3_st |
195.62 |
359.32 |
1.836827 |
-1.51174 |
0.169049 |
0.281499 |
| AFFX-BioC-5_st |
114.36 |
183.8 |
1.607205 |
-2.17372 |
0.061461 |
0.316596 |
|
|
||||||
| AFFX-BioC-3_st |
57.36 |
94.86 |
1.653766 |
-0.62822 |
0.547374 |
0.2079 |
|
|
||||||
| AFFX-BioDn-5_st |
1981.88 |
2327.5 |
1.17439 |
-0.99146 |
0.350498 |
0.242595 |
|
|
||||||
| AFFX-BioDn-3_st |
1487.74 |
2265.06 |
1.522484 |
-2.01951 |
0.078118 |
0.309434 |
|
|
||||||
| AFFX-CreX-5_st |
950.56 |
1221.04 |
1.284548 |
-1.42444 |
0.192137 |
0.275814 |
|
|
||||||
| AFFX-CreX-3_st |
2610.3 |
3429.5 |
1.313834 |
-1.21894 |
0.257585 |
0.261147 |
|
|
||||||
| AFFX-DapX-5_at |
204.42 |
267.12 |
1.306721 |
0.187522 |
0.85592 |
0.16092 |
|
|
||||||
| AFFX-DapX-M_at |
299.3 |
347.62 |
1.161443 |
0.119799 |
0.907597 |
0.153866 |
|
|
||||||
| AFFX-DapX-3_at |
192.64 |
95.82 |
0.497404 |
1.5611 |
0.157123 |
0.284581 |
|
|
||||||
| AFFX-LysX-5_at |
132.46 |
115.9 |
0.874981 |
0.445594 |
0.667702 |
0.188634 |
|
|
||||||
| AFFX-LysX-M_at |
174.16 |
204.14 |
1.172141 |
-0.09641 |
0.92557 |
0.151477 |
|
|
||||||
| AFFX-LysX-3_at |
47.8 |
167.94 |
3.513389 |
-1.2216 |
0.256632 |
0.261348 |
|
|
||||||
| AFFX-PheX-5_at |
33.04 |
55.5 |
1.679782 |
-2.04285 |
0.07534 |
0.310549 |
|
|
||||||
| AFFX-PheX-M_at |
40.64 |
29.66 |
0.729823 |
1.223746 |
0.255865 |
0.261511 |
|
|
||||||
| AFFX-PheX-3_at |
497.66 |
217.12 |
0.436282 |
2.826877 |
0.022257 |
0.342932 |
|
|
||||||
| AFFX-ThrX-5_at |
92.06 |
184.74 |
2.006735 |
-0.26462 |
0.797994 |
0.169127 |
|
|
||||||
| AFFX-ThrX-M_at |
225.32 |
272.46 |
1.209214 |
-0.33299 |
0.747704 |
0.17649 |
|
|
||||||
| AFFX-ThrX-3_at |
114.54 |
95.08 |
0.830103 |
-0.17193 |
0.86776 |
0.15928 |
|
|
||||||
| AFFX-TrpnX-5_at |
73 |
96.68 |
1.324384 |
-0.82529 |
0.433126 |
0.227452 |
|
|
||||||
| AFFX-TrpnX-M_at |
30.12 |
37.74 |
1.252988 |
-0.31889 |
0.757976 |
0.174969 |
|
|
||||||
Trivedi et al. BMC Bioinformatics 2005 6:86 doi:10.1186/1471-2105-6-86 |
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