BMC Bioinformatics

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A standard curve based method for relative real time PCR data processing

Alexey Larionov*, Andreas Krause and William Miller

BMC Bioinformatics 2005, 6:62 doi:10.1186/1471-2105-6-62

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BioMed Central: 11 citations

Research article   Open Access

Large-scale RNAi screen of G protein-coupled receptors involved in larval growth, molting and metamorphosis in the red flour beetle

Hua Bai, Fang Zhu, Kapil Shah, Subba Palli BMC Genomics 2011, 12:388 (1 August 2011)

Research article   Open Access

Effect of the feeding system on the fatty acid composition, expression of the Δ9-desaturase, Peroxisome Proliferator-Activated Receptor Alpha, Gamma, and Sterol Regulatory Element Binding Protein 1 genes in the semitendinous muscle of light lambs of the Rasa Aragonesa breed

Elda Dervishi, Carmen Serrano, Margalida Joy, Malena Serrano, Clementina Rodellar, Jorge H Calvo BMC Veterinary Research 2010, 6:40 (22 July 2010)

Methodology article   Open Access Highly Accessed

Microarray analysis of relative gene expression stability for selection of internal reference genes in the rhesus macaque brain

Nigel C Noriega, Steven G Kohama, Henryk F Urbanski BMC Molecular Biology 2010, 11:47 (21 June 2010)

Research article   Open Access Highly Accessed

Ligand-specific sequential regulation of transcription factors for differentiation of MCF-7 cells

Yuko Saeki, Takaho Endo, Kaori Ide, Takeshi Nagashima, Noriko Yumoto, Tetsuro Toyoda, Harukazu Suzuki, Yoshihide Hayashizaki, Yoshiyuki Sakaki, Mariko Okada-Hatakeyama BMC Genomics 2009, 10:545 (20 November 2009)

Heregulin and EGF bind the same receptor and induce similar early responses in breast cancer cells, but a later sequence of transcription factors induced only by heregulin, including FosL1 and FHL2, suppresses ERK signaling to give differentiation rather than proliferation

Software   Open Access Highly Accessed

QPCR: Application for real-time PCR data management and analysis

Stephan Pabinger, Gerhard G Thallinger, René Snajder, Heiko Eichhorn, Robert Rader, Zlatko Trajanoski BMC Bioinformatics 2009, 10:268 (27 August 2009)

Research article   Open Access Highly Accessed

Tumor aromatase expression as a prognostic factor for local control in young breast cancer patients after breast-conserving treatment

Marc A Bollet, Alexia Savignoni, Leanne De Koning, Carine Tran-Perennou, Catherine Barbaroux, Armelle Degeorges, Brigitte Sigal-Zafrani, Geneviève Almouzni, Paul Cottu, Rémy Salmon, Nicolas Servant, Alain Fourquet, Patricia de Cremoux Breast Cancer Research 2009, 11:R54 (28 July 2009)

Low aromatase and estrogen receptor beta expression, and increased GATA3 expression are associated with an augmented locoregional recurrence rate of tumours in premenopausal breast cancer patients, following breast conserving treatment.

Short Report   Open Access

Bipotential mouse embryonic liver (BMEL) cells spontaneously express Pdx1 and Ngn3 but do not undergo further pancreatic differentiation upon Hes1 down-regulation

Juliette Delisle, Lionel Martignat, Jean-Marie Bach, Steffi Bösch, Vanessa Louzier BMC Research Notes 2008, 1:136 (24 December 2008)

Methodology article   Open Access Highly Accessed

Detection limits of several commercial reverse transcriptase enzymes: impact on the low- and high-abundance transcript levels assessed by quantitative RT-PCR

Jean-Philippe Levesque-Sergerie, Mathieu Duquette, Catherine Thibault, Louis Delbecchi, Nathalie Bissonnette BMC Molecular Biology 2007, 8:93 (22 October 2007)

Research article   Open Access

Large-scale polymorphism of heterochromatic repeats in the DNA of Arabidopsis thaliana

Jerry Davison, Anand Tyagi, Luca Comai BMC Plant Biology 2007, 7:44 (16 August 2007)

Variation in heterochromatic repeat arrays across geographically separate populations of Arabidopsis could account for up to 50% of the variance in genome size among accessions, a finding with implications for estimating and validating genome sizes.

Research article   Open Access

Characterization of ovine hepatic gene expression profiles in response to Escherichia coli lipopolysaccharide using a bovine cDNA microarray

Honghe Cao, Leah C Kabaroff, Qiumei You, Alexander Rodriguez, Herman J Boermans, Niel A Karrow BMC Veterinary Research 2006, 2:34 (29 November 2006)

Methodology article   Open Access

Evaluation of absolute quantitation by nonlinear regression in probe-based real-time PCR

Rasmus Goll, Trine Olsen, Guanglin Cui, Jon Florholmen BMC Bioinformatics 2006, 7:107 (3 March 2006)