Table 1

GMOD and Argos components used in wFleaBase

Section

Components


wFleaBase

Data, database files, documents, web tools specific to Daphnia

Java

Chado database tools, genome sequence reports, LuceGene search, Ant build system, database interfaces, XML tools, Tomcat web server, Axis web services

Perl

BioPerl, GBrowse, Chado database tools, Cmap comparative maps, database interfaces, Web tools, XML tools

Servers

BLAST (NCBI), Apache web server, PostgreSQL, and BerkeleyDB databases

Systems

Compiled portions for supported operating systems

Install & Root

Common configurations, web server, installation scripts and instructions


Colbourne et al. BMC Bioinformatics 2005 6:45   doi:10.1186/1471-2105-6-45

Open Data