Table 2

Frequencies of different size groups of the p-values of the original two-part test and the two-part permutation test for genes with at least one truncation; data from the microarray experiment of Tschentscher et al. [11]

p-value of the original two-part test
p-value of the two-part permutation test

≤ 0.001
> 0.001 and ≤ 0.01
> 0.01 and ≤ 0.05
> 0.05 and ≤ 0.1
> 0.1

≤ 0.001
19
0
0
0
0
> 0.001 and ≤ 0.01
39
56
0
0
0
> 0.01 and ≤ 0.05
0
50
164
8
0
> 0.05 and ≤ 0.1
0
0
49
112
17
> 0.1
0
0
0
53
1648

Neuhäuser et al. BMC Bioinformatics 2005 6:35   doi:10.1186/1471-2105-6-35