BMC Bioinformatics

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Comparison of normalization methods for CodeLink Bioarray data

Wei Wu*, Nilesh Dave, George C Tseng, Thomas Richards, Eric P Xing and Naftali Kaminski

BMC Bioinformatics 2005, 6:309 doi:10.1186/1471-2105-6-309

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Research article   Open Access

Normalization with genes encoding ribosomal proteins but not GAPDH provides an accurate quantification of gene expressions in neuronal differentiation of PC12 cells

Lihan Zhou, Qing-En Lim, Guoqiang Wan, Heng-Phon Too BMC Genomics 2010, 11:75 (29 January 2010)

Method   Open Access Highly Accessed

A novel and universal method for microRNA RT-qPCR data normalization

Pieter Mestdagh, Pieter Van Vlierberghe, An De Weer, Daniel Muth, Frank Westermann, Frank Speleman, Jo Vandesompele Genome Biology 2009, 10:R64 (16 June 2009)

The mean expression value: a new method for accurate and reliable normalization of microRNA expression data from RT-qPCR experiments.

Research article   Open Access

Development and validation of a gene expression oligo microarray for the gilthead sea bream (Sparus aurata)

Serena Ferraresso, Nicola Vitulo, Alba N Mininni, Chiara Romualdi, Barbara Cardazzo, Enrico Negrisolo, Richard Reinhardt, Adelino VM Canario, Tomaso Patarnello, Luca Bargelloni BMC Genomics 2008, 9:580 (3 December 2008)

The development of a microarray for the gilthead sea bream may help in overcoming production bottlenecks in the aquaculture of this important marine teleost.

Methodology article   Open Access Highly Accessed

Using Generalized Procrustes Analysis (GPA) for normalization of cDNA microarray data

Huiling Xiong, Dapeng Zhang, Christopher J Martyniuk, Vance L Trudeau, Xuhua Xia BMC Bioinformatics 2008, 9:25 (16 January 2008)