Discover protein sequence signatures from protein-protein interaction data

doi:10.1186/1471-2105-6-277

BMC Bioinformatics

Volume 6

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Research article

Discover protein sequence signatures from protein-protein interaction data

Jianwen Fang¹^,2 , Ryan J Haasl¹ , Yinghua Dong¹ and Gerald H Lushington¹^,3

¹Bioinformatics Core Facility, University of Kansas, Lawrence, KS 66045, USA

²Information and Telecommunication Technology Center, University of Kansas, Lawrence, KS 66045, USA

³Molecular Graphics and Modeling Laboratory, University of Kansas, Lawrence, KS 66045, USA

author email corresponding author email

BMC Bioinformatics 2005, 6:277doi:10.1186/1471-2105-6-277


Published:	23 November 2005

Additional files

Additional File 1:

Homology models of five yeast proteins. The following files are available in the complementary website http://www.bcf.ku.edu/PPI/ webcite: MEME output files for all novel signatures, PDB files of five homology models, a complete list of identified novel signatures and a list of these signatures grouped by similarity, a complete list of protein location prediction, and the distribution of the number of interaction partners.

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