Table 3

Identification of Small-molecules noted in Ref. 14

abbreviation
author name
PubChem ID
Notes




Not found directly in PubChem. Located in supplier's catalog. Synonym from that found in PubChem
2MeSADP
2-methylthio-ADP
[121990]

5-HT
5-hydroxytryptamine
5202

CCh
carbacholine
521353

CP-55940
(-)-3-[2-hydroxy-4-(1,1-dimeth ylheptyl)-phenyl]-4-[3-hydroxyp ropyl]cyclohexan-1-ol
104895
IUPAC: 5-(1,1-dimethylheptyl)-2-[5-hydroxy-2-(3-hydroxyprop yl)cyclohexyl]-phenol
CysNO
S-nitrosocysteine
39933

CysNOGly
S-nitroso-cysteinyl-glycine

Text search on PubChem found wrong compound. Not found in major supplier
DAMGO
[D-Ala2, N-Me-Phe4, Gly5-ol]-enkephalin
104742

DPCPX
8-cyclopentyl-1,3-dipropylxanthi ne
1320

Glu-CysNO
L-?-glutamyl-S-nitrosocysteine

Identity unresolved
GSH
glutathione
745

GSNO
S-nitrosoglutathione
104858

LPA
lysophosphatidic acid
3987

NA
noradrenaline
951
PubChem CID covers both racemic and d-enantiomer
NO
nitric oxide
84878
PubChem also lists 945 (with incorrect formula HNO) as nitric oxide
NOBF4
nitrosodium tetrafluoroborate
151929
Paper has a typographical error for "nitrosonium". Structure in PubChem is wrong (formula should be NO+BF4-, not H2NO+.BF4-)
SNAP
S-nitroso-N-acetyl-D,L-penicill amine
5231
PubChem does not list stereochemistry
RSNO
S-nitrosothiol

Appears to be a generic compound (R-S-N=O)
SNP
sodium nitroprusside
26256


Murray-Rust et al. BMC Bioinformatics 2005 6:180   doi:10.1186/1471-2105-6-180