Table 4 |
|||
|
Blastn similarities to MPrime computed oligos. 1mRNA sequence from which the RefSeq sequence was derived. |
|||
|
Gene name |
GenBank identifier |
Score (bits) |
Notes |
|
|
|||
|
GAPDH |
47607489 |
139 |
RefSeq entry for GAPDH |
|
|
|||
|
Actb |
6671508 |
139 |
RefSeq entry for Actb |
|
498651 |
139 |
mRNA for beta actin |
|
|
26104752 |
139 |
beta actin cDNA |
|
|
191660 |
139 |
Mouse A-X beta actin mRNA |
|
|
22316184 |
99.6 |
Chromosome X genomic sequence |
|
|
Sdf4 |
46195814 |
139 |
RefSeq entry for Sdf4 |
|
475687541 |
139 |
mRNA for Sdf4 |
|
|
21953005 |
139 |
Chromosome 4 genomic sequence |
|
|
26097254 |
131 |
Unknown EST |
|
|
Ubb |
6755918 |
139 |
RefSeq entry for Ubb |
|
551771 |
139 |
mRNA for Ubb |
|
|
Ywhaz |
31981422 |
139 |
RefSeq entry for Ywhaz |
|
297480011 |
139 |
mRNA for Ywhaz |
|
|
1304165 |
139 |
mRNA for phosholipase A2 |
|
|
Hprt |
7305154 |
139 |
RefSeq entry for Hprt |
|
1939841 |
139 |
mRNA for Hprt |
|
|
38348687 |
139 |
Chromosome X genomic sequence |
|
|
Tubd1 |
9790052 |
139 |
RefSeq entry for Tubd1 |
|
58137751 |
139 |
mRNA for Tubd1 |
|
|
17221230 |
139 |
Chromosome 11 genomic sequence |
|
|
Tuba1 |
6755900 |
139 |
RefSeq entry for Tuba1 |
|
2022071 |
139 |
mRNA for Tuba1 |
|
|
202222 |
139 |
Tuba1 gene, 3' end |
|
|
Ppicap |
6755143 |
139 |
RefSeq entry for Lgals3bp (Ppicap pseudonym) |
|
2970321 |
139 |
mRNA for mama |
|
|
17017768 |
139 |
Chromosome 11 genomic sequence |
|
|
26348284 |
139 |
Ppicap cDNA |
|
|
397799 |
139 |
CyCAP mRNA |
|
|
Hspca |
42476088 |
139 |
RefSeq entry for Hspca |
|
128359861 |
139 |
Hspca mRNA |
|
|
Htf9c |
6680314 |
139 |
RefSeq entry for Htf9c |
|
3189761 |
139 |
Htf9c mRNA |
|
|
3818382 |
139 |
Chromosome 16 genomic sequence |
|
|
|
|||
|
Rouchka et al. BMC Bioinformatics 2005 6:175 doi:10.1186/1471-2105-6-175 |
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