Proceedings  

Integrating diverse biological and computational sources for reliable protein-protein interactions

Min Wu, Xiaoli Li, Hon Chua, Chee-Keong Kwoh, See-Kiong Ng BMC Bioinformatics 2010, 11(Suppl 7):S8 (15 October 2010)

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Research article  

Predicting protein-protein interactions in Arabidopsis thaliana through integration of orthology, gene ontology and co-expression

Stefanie De Bodt, Sebastian Proost, Klaas Vandepoele, Pierre Rouzé, Yves Van de Peer BMC Genomics 2009, 10:288 (29 June 2009)

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Research article  

Triangle network motifs predict complexes by complementing high-error interactomes with structural information

Bill Andreopoulos, Christof Winter, Dirk Labudde, Michael Schroeder BMC Bioinformatics 2009, 10:196 (27 June 2009)

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Research article  

Protein-protein interaction as a predictor of subcellular location

Chang Shin, Simon Wong, Melissa J Davis, Mark A Ragan BMC Systems Biology 2009, 3:28 (25 February 2009)

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Methodology article  

Improved homology-driven computational validation of protein-protein interactions motivated by the evolutionary gene duplication and divergence hypothesis

Christian Frech, Michael Kommenda, Viktoria Dorfer, Thomas Kern, Helmut Hintner, Johann W Bauer, Kamil Önder BMC Bioinformatics 2009, 10:21 (19 January 2009)

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Research article  

An in silico method for detecting overlapping functional modules from composite biological networks

Ioannis A Maraziotis, Konstantina Dimitrakopoulou, Anastasios Bezerianos BMC Systems Biology 2008, 2:93 (1 November 2008)

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Research article  

Prediction of evolutionarily conserved interologs in Mus musculus

Sailu Yellaboina, Dawood B Dudekula, Minoru SH Ko BMC Genomics 2008, 9:465 (8 October 2008)

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Research article  

Discovering functional interaction patterns in protein-protein interaction networks

Mehmet E Turanalp, Tolga Can BMC Bioinformatics 2008, 9:276 (11 June 2008)

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Research  

The MoVIN server for the analysis of protein interaction networks

Paolo Marcatili, Giovanni Bussotti, Anna Tramontano BMC Bioinformatics 2008, 9(Suppl 2):S11 (26 March 2008)

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Research article  

Growing functional modules from a seed protein via integration of protein interaction and gene expression data

Ioannis A Maraziotis, Konstantina Dimitrakopoulou, Anastasios Bezerianos BMC Bioinformatics 2007, 8:408 (23 October 2007)

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Opinion  

How complete are current yeast and human protein-interaction networks?

G Traver Hart, Arun K Ramani, Edward M Marcotte Genome Biology 2006, 7:120 (1 December 2006)

Abstract | Full text | PDF | PubMed | Cited on BioMed Central |  Editor’s summary

Review  

Parameter estimate of signal transduction pathways

Ivan Arisi, Antonino Cattaneo, Vittorio Rosato BMC Neuroscience 2006, 7(Suppl 1):S6 (30 October 2006)

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Research article  

Finding function: evaluation methods for functional genomic data

Chad L Myers, Daniel R Barrett, Matthew A Hibbs, Curtis Huttenhower, Olga G Troyanskaya BMC Genomics 2006, 7:187 (25 July 2006)

Abstract | Full text | PDF | PubMed | Cited on BioMed Central | F1000 Biology