Table 2

The dataset of homodimers.

Interacting protein^a

Contact data^b

Alternative splicing data

Chain

Length

Contact area (Ų)

Interacting residues

Type^c

Start^d

End^d

Length^e

1IKN-A

285

698.19

195, 197–201, 211, 213–218, 242, 243, 245, 246, 248–251

subst.

19

24

7

del.

85

112

0

del. subst.

85

290

18

del.

113

290

0

del. subst.

186

291

1

del.

186

219

0

1A15-A

67

752.65

20–31, 35, 36, 61, 62, 64–67

del.

16

39

0

del. subst.

63

67

10

del.

40

49

0

1DOM-A

76

849.23

3–18, 20, 29, 31, 33–38, 40–43, 49–53

del. subst.

42

76

1

1CNT-1

177

954.74

11, 19, 81, 84, 91, 92, 95, 96, 100–103, 106–111, 113–115, 117, 118, 120–122, 124, 125, 128, 129, 133–137, 140

del. subst.

49

187

24

1TRZ-A

21

74.10

21

1

15

^a Nooren & Thornton, 2003 ^b http://www.biochem.ucl.ac.uk/bsm/PP/server webcite^c del. = deletion of residues, subst. = substitution of residues. ^d residue numbers according to PDB file numbering ^e Length of the substituted part

Offman et al. BMC Bioinformatics 2004 5:41   doi:10.1186/1471-2105-5-41