Table 4 |
||||||
|
Comparison of four unrelated protein clusters provided by right singular vectors with KOG and Homologen clusters. Descriptions for each of these clusters are provided in Table 2. Only proteins having one of the five strongest projections ("top five") for a given singular vector are used in the comparison. |
||||||
|
rsv# |
gi# |
projection |
organism |
GeneName |
kog# |
hg# |
|
|
||||||
|
272a |
en165011 |
0.06928 |
Frub |
na |
na |
na |
|
(Kcna) |
25742772 |
0.06865 |
Rnov |
Kcna2 |
na |
21034 |
|
4826782 |
0.06834 |
Hsap |
Kcna2 |
1545 |
21034 |
|
|
31543024 |
0.06821 |
Mmus |
Kcna2 |
na |
21034 |
|
|
27465523 |
0.06632 |
Rnov |
Kcna1 |
na |
183 |
|
|
304 |
12963491 |
0.101507 |
Mmus |
Eno1 |
na |
1093 |
|
(Eno) |
6978809 |
0.101252 |
Rnov |
Eno1 |
na |
1093 |
|
4503571 |
0.097337 |
Hsap |
Eno1 |
2670 |
1093 |
|
|
51770896 |
0.092899 |
Mmus |
Eno1 |
na |
1093 |
|
|
en150208 |
0.091209 |
Frub |
na |
na |
na |
|
|
316a |
32189350 |
0.11376 |
Rnov |
Slc25a5 |
na |
37448 |
|
(Slc25) |
22094075 |
0.11343 |
Mmus |
Slc25a5 |
na |
37448 |
|
4502099 |
0.11202 |
Hsap |
Slc25a5 |
0749 |
37448 |
|
|
en159404 |
0.1034 |
Frub |
na |
na |
na |
|
|
20863388 |
0.10117 |
Mmus |
Slc25a4 |
na |
36058 |
|
|
373a |
4502201 |
0.12887 |
Hsap |
Arf1 |
0070 |
1253 |
|
(Arf) |
6680716 |
0.12887 |
Mmus |
Arf1 |
na |
1253 |
|
11968098 |
0.12887 |
Rnov |
Arf1 |
na |
1253 |
|
|
24668762 |
0.12856 |
Dmel |
Arf79F |
0070 |
1253 |
|
|
24668773 |
0.12856 |
Dmel |
Arf79F |
0070 |
1253 |
|
|
|
||||||
|
Stuart and Berry BMC Bioinformatics 2004 5:204 doi:10.1186/1471-2105-5-204 |
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