Methodology article  

A white-box approach to microarray probe response characterization: the BaFL pipeline

Kevin J Thompson, Hrishikesh Deshmukh, Jeffrey L Solka, Jennifer W Weller BMC Bioinformatics 2009, 10:449 (29 December 2009)

Abstract | Full text | PDF | PubMed

Methodology article  

Characterisation and correction of signal fluctuations in successive acquisitions of microarray images

Annie Glatigny, Hervé Delacroix, Thomas Tang, Nicolas François, Lawrence Aggerbeck, Marie-Hélène Mucchielli-Giorgi BMC Bioinformatics 2009, 10:98 (30 March 2009)

Abstract | Full text | PDF | PubMed

Research article  

Evaluation of microarray data normalization procedures using spike-in experiments

Patrik Rydén, Henrik Andersson, Mattias Landfors, Linda Näslund, Blanka Hartmanová, Laila Noppa, Anders Sjöstedt BMC Bioinformatics 2006, 7:300 (14 June 2006)

Abstract | Full text | PDF | PubMed | Cited on BioMed Central

Methodology article  

Methodological study of affine transformations of gene expression data with proposed robust non-parametric multi-dimensional normalization method

Henrik Bengtsson, Ola Hössjer BMC Bioinformatics 2006, 7:100 (1 March 2006)

Abstract | Full text | PDF | PubMed | Cited on BioMed Central

Research article  

Microarray image analysis: background estimation using quantile and morphological filters

Anders Bengtsson, Henrik Bengtsson BMC Bioinformatics 2006, 7:96 (28 February 2006)

Abstract | Full text | PDF | PubMed | Cited on BioMed Central

Proceedings  

Microarray scanner calibration curves: characteristics and implications

Leming Shi, Weida Tong, Zhenqiang Su, Tao Han, Jing Han, Raj K Puri, Hong Fang, Felix W Frueh, Federico M Goodsaid, Lei Guo, William S Branham, James J Chen, Z Alex Xu, Stephen C Harris, Huixiao Hong, Qian Xie, Roger G Perkins, James C Fuscoe BMC Bioinformatics 2005, 6(Suppl 2):S11 (15 July 2005)

Abstract | Full text | PDF | PubMed | Cited on BioMed Central